CDS

Accession Number TCMCG021C34146
gbkey CDS
Protein Id XP_019709911.1
Location complement(join(6861717..6861882,6862395..6862459,6862867..6863014,6863139..6863332,6866803..6867144,6869094..6869158,6870400..6870611,6875833..6875945,6876071..6876217,6876440..6876641,6878343..6878500))
Gene LOC105056101
GeneID 105056101
Organism Elaeis guineensis

Protein

Length 603aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268357
db_source XM_019854352.2
Definition histone deacetylase 5 isoform X5 [Elaeis guineensis]

EGGNOG-MAPPER Annotation

COG_category B
Description Histone deacetylase domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K11407        [VIEW IN KEGG]
EC 3.5.1.98        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko05034        [VIEW IN KEGG]
ko05165        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map05034        [VIEW IN KEGG]
map05165        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004407        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006476        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010053        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016575        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016810        [VIEW IN EMBL-EBI]
GO:0016811        [VIEW IN EMBL-EBI]
GO:0019213        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030856        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033558        [VIEW IN EMBL-EBI]
GO:0035601        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045604        [VIEW IN EMBL-EBI]
GO:0045682        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0098732        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAGCACCGGAAGATCCCCACCGCCGGCGCGTCGGCCTCCTGTACGACGAGCGGATGTGCCGCCACGCCACCCCCGACGGCGAGATTCATCCGGAGAATCCCGACCGGATCCGCGCCATCTGGCAGAAGCTCGAGTCCGAGGGGATTCCCCTAAGGTGTGTAGTTCTGAGTGCCAAGGAAGCTGAGGATAAGTACATAGCATCTGTTCATACCGCAAGGCATATCAAGCTGATCAAGAATATCAGCTCAAAAAAATTTAATTCTCAACGTCTTAGGATTGCCTCAGAGTTCAATTCTATATATTTTAACAAGGGTTCATCTGAAGCTTCTTACCTTGCAGCAGGCTCAGTTATGGAGGTATCTGAAAAGGTGGCCAAAGGGGATTTGGATTCGGCTATTGCCATTGTGAGGCCTCCTGGCCATCATGCAGAATCTGATGAAGCTATGGGGTTTTGTCTGTTCAATAATGTTGCAATTGCAGCTAATTTTCTCTTGAATGAAAGGCCAGAGTTAGGTATAAGAAAGATACTAATTGTGGATTGGGATGTTCACCATGGTAATGGCACTCAAAATATGTTTTACAATGACCCTCGGGTACTGTTCTTTTCTGTTCACAGGTTTGATTTTGGAATGTTCTATCCTGCTAGTGGTGATGGTTCATATTGCATGATTGGTGAAGGGCCGGGTGCAGGATACAACATCAATGTTCCTTGGGAACAAGGACAATGTGGTGATGCAGATTATGTAGCTGTCTGGGACCATGTATTGCTTCCTGTAGCTGAATCTTACGATCCTGACATAATATTGATTTCTGCTGGATTTGATGCAGCTGTTGATGATCCGCTTGGTGGTTGTTGCATCACCCCATATGGATATTCGCTCATGTTGAAAAAGCTAAACTTGAGCTCTAGCTCTGAGTCTATTGTGGAGAATGACGGAGGAGCTTCTGTCACTATATGTGCCACAAACTTCGTTGAGATTATTGAGCCCCTTTCAAAGTTGAATATTGATGAAGATAATCATGGGAAAGCAATCACCTTGGACCACATTGCAACTGACAAAAGTCCTGTTGTTTTATCTGAAGAATGTCCTAATGCTCAAGCATTGATGCCTGATAAGAATGTTGATGGTTGTACACGTTGGAGATCAGTTTTATCAAAAACTGAAGTTTGGTATGGCAGTTATGGATCAAATATGTGGAAACCAGGGTTTCTCTGCTACATCAAAGGTGGAAAGGTGGAAGGTATGAATGAACCATGTCCTGGATCACAAGATAAAAGTTCGCCAAAAGGTGTCATCTGGAAAACTGTGCCCCATCAGCTATTCTTTGCAAGATCTCTCACCCGCACATGGGGTAAAGGAGGAGTTGCTTTTCTTCATCCTGAAAGCAACAAAAATGACAAAGCCTACATGTGCATGTATAGAATAACACTCGAGCAGTTCAATGATGTATTGCTTCAAGAGAATAGTCTACATCAAGAGAATGGTAAAAGCCAAGGTGCAGGAGCACCTTTATTGGATCTATCTGATATTGGTGTTGTTGCTGAAAACAAGTCATTGCCTCTGGAGGCTCTCAAGGCTGGATGGTATTCTAACATCCTTTATTTAGGGGAGGAGGATAACCTTCCTATCTTAACTATGACGTGCTCATGCTCAGAGATTGATCAATTTAGATCTGGTGAATTACCTGTATCTGGCCCTTCAAATGATTACATGAATACATTAGTGAGAGGATTGGTAGAAGGGAAACAGATTACAAGAGAGGAAGCAATTGCTTACATTAATGATGCTGCTATGAGAGAGTTATAA
Protein:  
MAAPEDPHRRRVGLLYDERMCRHATPDGEIHPENPDRIRAIWQKLESEGIPLRCVVLSAKEAEDKYIASVHTARHIKLIKNISSKKFNSQRLRIASEFNSIYFNKGSSEASYLAAGSVMEVSEKVAKGDLDSAIAIVRPPGHHAESDEAMGFCLFNNVAIAANFLLNERPELGIRKILIVDWDVHHGNGTQNMFYNDPRVLFFSVHRFDFGMFYPASGDGSYCMIGEGPGAGYNINVPWEQGQCGDADYVAVWDHVLLPVAESYDPDIILISAGFDAAVDDPLGGCCITPYGYSLMLKKLNLSSSSESIVENDGGASVTICATNFVEIIEPLSKLNIDEDNHGKAITLDHIATDKSPVVLSEECPNAQALMPDKNVDGCTRWRSVLSKTEVWYGSYGSNMWKPGFLCYIKGGKVEGMNEPCPGSQDKSSPKGVIWKTVPHQLFFARSLTRTWGKGGVAFLHPESNKNDKAYMCMYRITLEQFNDVLLQENSLHQENGKSQGAGAPLLDLSDIGVVAENKSLPLEALKAGWYSNILYLGEEDNLPILTMTCSCSEIDQFRSGELPVSGPSNDYMNTLVRGLVEGKQITREEAIAYINDAAMREL